 |
 |
 |
 |
 |
 |
||
 |
 |
 |
 |
 |
| 5 | 1/1 | 返回列表 |
| 查看: 2035 | 回復(fù): 6 | |||
| 當(dāng)前只顯示滿足指定條件的回帖，點(diǎn)擊這里查看本話題的所有回帖 | |||
wnryc新蟲 (初入文壇)
|
[交流]
【求助】跑vasp時(shí), mpich2運(yùn)行有時(shí)有問題 已有4人參與
|
||
|
Hi, All 我在RHEL 5.4; mpich2-1.2.1p1;pgi-9.0.1;雙核Xeon E5504 (intel CPU)環(huán)境下跑并行的vasp。有些作業(yè)，能夠正常并行計(jì)算（使用命令：mpiexec -n 8 vasp.pgi >out& 或者mpiexec -n 8 vasp.pgi out&，有些作業(yè)卻不能運(yùn)行（我安裝mpich2, pgi.9.0.1沒有問題），這時(shí)程序讀了INCAR，POTCAR，POSCAR和KPOINTS文件后，屏幕提示如下的錯(cuò)誤： ---------------------------------------------------------------------- running on 8 nodes distr: one band on 1 nodes, 8 groups vasp.4.6.21 23Feb03 complex POSCAR found : 3 types and 30 ions LDA part: xc-table for Ceperly-Alder, Vosko type interpolation para-ferro POSCAR, INCAR and KPOINTS ok, starting setup WARNING: wrap around errors must be expected mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & FFT: planning ... 2 reading WAVECAR mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & WARNING: random wavefunctions but no delay for mixing, default for NELMDL entering main loop N E dE d eps ncg rms rms(c) rank 6 in job 36 qltang1_54199 caused collective abort of all ranks exit status of rank 6: killed by signal 9 rank 3 in job 36 qltang1_54199 caused collective abort of all ranks exit status of rank 3: killed by signal 9 ---------------------------------------------------------- 不知道這是什么原因。苦惱了很久，特請(qǐng)大家?guī)兔鉀Q下，謝謝！ |
回復(fù)此樓» 猜你喜歡
354求調(diào)劑
已經(jīng)有5人回復(fù)
-
材料專業(yè)求調(diào)劑
已經(jīng)有3人回復(fù)
-
求材料調(diào)劑
已經(jīng)有7人回復(fù)
-
一志愿天大材料與化工（085600）總分338
已經(jīng)有3人回復(fù)
-
085600材料與化工
已經(jīng)有5人回復(fù)
-
085600材料與化工調(diào)劑 324分
已經(jīng)有6人回復(fù)
-
286求調(diào)劑
已經(jīng)有9人回復(fù)
-
焦慮
已經(jīng)有12人回復(fù)
-
344求調(diào)劑
已經(jīng)有6人回復(fù)
-
266求調(diào)劑
已經(jīng)有9人回復(fù)
» 本主題相關(guān)價(jià)值貼推薦，對(duì)您同樣有幫助:
- 石墨烯納米帶 vasp建模 邊緣如何加氫
已經(jīng)有28人回復(fù)
- 一些凝聚態(tài)專業(yè)的知識(shí)和關(guān)于vasp的知識(shí)
已經(jīng)有83人回復(fù)
- vasp5.2計(jì)算光學(xué)性質(zhì)
已經(jīng)有22人回復(fù)
- vasp跨節(jié)點(diǎn)運(yùn)行出錯(cuò)，mpiexec_node-1 (handle_stdin_input 1089)
已經(jīng)有5人回復(fù)
- vasp5.2 openmpi+intel+mkl編譯，能量正值問題
已經(jīng)有7人回復(fù)
- vasp5.2計(jì)算誤差太大
已經(jīng)有11人回復(fù)
- 【求助】vasp5.2為什么連接網(wǎng)線才能運(yùn)行
已經(jīng)有5人回復(fù)
- 【求助成功】vasp5.2并行安裝不上
已經(jīng)有18人回復(fù)
- 【分享】vasp2cif.f90 for vasp5.2
已經(jīng)有4人回復(fù)
- 【求助】vasp并行安裝mpich2的錯(cuò)誤
已經(jīng)有10人回復(fù)
- 【求助】vasp 編譯時(shí)候沒有錯(cuò)誤提示，但是運(yùn)行時(shí)出現(xiàn)“段錯(cuò)誤”
已經(jīng)有14人回復(fù)
- 【求助】Performing VASP: mpich2 someties breaks down
已經(jīng)有21人回復(fù)
- 【求助】為什么vasp運(yùn)行時(shí)cpu使用率很不均衡？
已經(jīng)有9人回復(fù)
wnryc
新蟲 (初入文壇)
- 應(yīng)助: 0 (幼兒園)
- 金幣: 25.5
- 帖子: 42
- 在線: 18.7小時(shí)
- 蟲號(hào): 1038347
- 注冊(cè): 2010-06-08
- 性別: GG
- 專業(yè): 物理化學(xué)
5樓2010-06-16 09:37:55
gump_813276
銅蟲 (小有名氣)
- 應(yīng)助: 0 (幼兒園)
- 金幣: 164.5
- 帖子: 56
- 在線: 12.8小時(shí)
- 蟲號(hào): 549455
- 注冊(cè): 2008-04-21
2樓2010-06-15 19:34:54
wnryc
新蟲 (初入文壇)
- 應(yīng)助: 0 (幼兒園)
- 金幣: 25.5
- 帖子: 42
- 在線: 18.7小時(shí)
- 蟲號(hào): 1038347
- 注冊(cè): 2010-06-08
- 性別: GG
- 專業(yè): 物理化學(xué)
|
命令確實(shí)是mpiexec -n 8 vasp.pgi out&或mpiexec -n 8 vasp.pgi >out& 我按照你的：mpiexec -n 8 vasp.pgi &> out&，結(jié)果也出現(xiàn)同樣的報(bào)錯(cuò)信息： -------------------------------------------- [qltang@qltang1 pgi]$ vi out mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & WARNING: random wavefunctions but no delay for mixing, default for NELMDL entering main loop N E dE d eps ncg rms rms(c) Assertion failed in file /opt/software/tmp/mpich2-1.2.1p1/src/mpid/ch3/channels/nemesis/nemesis/include/mpid_nem_inline.h at line 728: local_rank < MPID_nem_mem_region.num_local internal ABORT - process 1 rank 5 in job 44 qltang1_54199 caused collective abort of all ranks exit status of rank 5: killed by signal 11 rank 1 in job 44 qltang1_54199 caused collective abort of all ranks exit status of rank 1: return code 1 ------------------------------------------------------------ 我注意到報(bào)錯(cuò)信息里有這樣一句話：“Assertion failed in file /opt/software/tmp/mpich2-1.2.1p1/src/mpid/ch3/channels/nemesis/nemesis/include/mpid_nem_inline.h at line 728: local_rank < MPID_nem_mem_region.num_local”。不知道m(xù)pich2為什么有時(shí)會(huì)出現(xiàn)這樣的錯(cuò)誤？ 請(qǐng)達(dá)人指教，謝謝！ |
3樓2010-06-15 20:27:34
4樓2010-06-15 22:19:39
| 最具人氣熱帖推薦 [查看全部] | 作者 | 回/看 | 最后發(fā)表 | |
|---|---|---|---|---|
|
[考研] 材料，紡織，生物（0856、0710），化學(xué)招生啦 +3 | Eember. 2026-03-17 | 9/450 |
|
|---|---|---|---|---|
|
|
[考研] 0703化學(xué)336分求調(diào)劑 +6 | zbzihdhd 2026-03-15 | 7/350 |
|
|
|
[考博] 26博士申請(qǐng) +3 | 1042136743 2026-03-17 | 3/150 |
|
|
|
[考研] 材料與化工求調(diào)劑 +6 | 為學(xué)666 2026-03-16 | 6/300 |
|
|
[考研] 277調(diào)劑 +5 | 自由煎餅果子 2026-03-16 | 6/300 |
|
|
|
[考研] 材料專碩326求調(diào)劑 +6 | 墨煜姒莘 2026-03-15 | 7/350 |
|
|
|
[考研] 梁成偉老師課題組歡迎你的加入 +8 | 一鴨鴨喲 2026-03-14 | 10/500 |
|
|
|
[考研] 290求調(diào)劑 +6 | 孔志浩 2026-03-12 | 11/550 |
|
|
|
[考研] 材料與化工專碩調(diào)劑 +5 | heming3743 2026-03-16 | 5/250 |
|
|
|
[考研] 318求調(diào)劑 +3 | Yanyali 2026-03-15 | 3/150 |
|
|
|
[考研] 0856專碩279求調(diào)劑 +5 | 加油加油！? 2026-03-15 | 5/250 |
|
|
|
[考研] 294求調(diào)劑 +3 | Zys010410@ 2026-03-13 | 4/200 |
|
|
|
[考研] 080500，材料學(xué)碩302分求調(diào)劑學(xué)校 +4 | 初識(shí)可樂 2026-03-14 | 5/250 |
|
|
|
[考研] 中科大材料專碩319求調(diào)劑 +3 | 孟鑫材料 2026-03-13 | 3/150 |
|
|
|
[考研] 一志愿哈工大材料324分求調(diào)劑 +5 | 閆旭東 2026-03-14 | 5/250 |
|
|
|
[考研] 材料工程調(diào)劑 +9 | 咪咪空空 2026-03-12 | 9/450 |
|
|
|
[考研] 0856材料與化工301求調(diào)劑 +5 | 奕束光 2026-03-13 | 5/250 |
|
|
|
[考研] 295求調(diào)劑 +3 | 小匕仔汁 2026-03-12 | 3/150 |
|
|
|
[論文投稿]
投稿問題
 5+4
|
星光燦爛xt 2026-03-12 | 6/300 |
|
|
|
[考博] 福州大學(xué)楊黃浩課題組招收2026年專業(yè)學(xué)位博士研究生，2026.03.20截止 +3 | Xiangyu_ou 2026-03-12 | 3/150 |
|