 |
 |
 |
 |
 |
 |
||
 |
 |
 |
 |
 |
| 5 | 1/1 | 返回列表 |
| 查看: 2037 | 回復: 6 | |||
| 當前只顯示滿足指定條件的回帖，點擊這里查看本話題的所有回帖 | |||
[交流]
【求助】跑vasp時, mpich2運行有時有問題 已有4人參與
|
|||
|
Hi, All 我在RHEL 5.4; mpich2-1.2.1p1;pgi-9.0.1;雙核Xeon E5504 (intel CPU)環(huán)境下跑并行的vasp。有些作業(yè)，能夠正常并行計算（使用命令：mpiexec -n 8 vasp.pgi >out& 或者mpiexec -n 8 vasp.pgi out&，有些作業(yè)卻不能運行（我安裝mpich2, pgi.9.0.1沒有問題），這時程序讀了INCAR，POTCAR，POSCAR和KPOINTS文件后，屏幕提示如下的錯誤： ---------------------------------------------------------------------- running on 8 nodes distr: one band on 1 nodes, 8 groups vasp.4.6.21 23Feb03 complex POSCAR found : 3 types and 30 ions LDA part: xc-table for Ceperly-Alder, Vosko type interpolation para-ferro POSCAR, INCAR and KPOINTS ok, starting setup WARNING: wrap around errors must be expected mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & FFT: planning ... 2 reading WAVECAR mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & WARNING: random wavefunctions but no delay for mixing, default for NELMDL entering main loop N E dE d eps ncg rms rms(c) rank 6 in job 36 qltang1_54199 caused collective abort of all ranks exit status of rank 6: killed by signal 9 rank 3 in job 36 qltang1_54199 caused collective abort of all ranks exit status of rank 3: killed by signal 9 ---------------------------------------------------------- 不知道這是什么原因�？鄲懒撕芫�，特請大家?guī)兔鉀Q下，謝謝！ |
回復此樓» 猜你喜歡
271材料工程求調劑
已經有5人回復
-
281求調劑（0805）
已經有16人回復
-
304求調劑
已經有6人回復
-
材料工程專碩調劑
已經有6人回復
-
一志愿天大材料與化工（085600）總分338
已經有4人回復
-
085700資源與環(huán)境308求調劑
已經有3人回復
-
求材料調劑
已經有8人回復
-
294求調劑材料與化工專碩
已經有5人回復
-
一志愿華中科技大學，080502，354分求調劑
已經有4人回復
-
一志愿吉林大學材料學碩321求調劑
已經有6人回復
» 本主題相關價值貼推薦，對您同樣有幫助:
- 石墨烯納米帶 vasp建模 邊緣如何加氫
已經有28人回復
- 一些凝聚態(tài)專業(yè)的知識和關于vasp的知識
已經有83人回復
- vasp5.2計算光學性質
已經有22人回復
- vasp跨節(jié)點運行出錯，mpiexec_node-1 (handle_stdin_input 1089)
已經有5人回復
- vasp5.2 openmpi+intel+mkl編譯，能量正值問題
已經有7人回復
- vasp5.2計算誤差太大
已經有11人回復
- 【求助】vasp5.2為什么連接網線才能運行
已經有5人回復
- 【求助成功】vasp5.2并行安裝不上
已經有18人回復
- 【分享】vasp2cif.f90 for vasp5.2
已經有4人回復
- 【求助】vasp并行安裝mpich2的錯誤
已經有10人回復
- 【求助】vasp 編譯時候沒有錯誤提示，但是運行時出現“段錯誤”
已經有14人回復
- 【求助】Performing VASP: mpich2 someties breaks down
已經有21人回復
- 【求助】為什么vasp運行時cpu使用率很不均衡？
已經有9人回復
ApolloYang
木蟲 (正式寫手)
- 應助: 15 (小學生)
- 金幣: 2209.6
- 散金: 114
- 紅花: 4
- 帖子: 390
- 在線: 236.9小時
- 蟲號: 582657
- 注冊: 2008-07-25
- 性別: GG
- 專業(yè): 凝聚態(tài)物性 II ：電子結構
7樓2010-07-31 20:15:33
2樓2010-06-15 19:34:54
|
命令確實是mpiexec -n 8 vasp.pgi out&或mpiexec -n 8 vasp.pgi >out& 我按照你的：mpiexec -n 8 vasp.pgi &> out&，結果也出現同樣的報錯信息： -------------------------------------------- [qltang@qltang1 pgi]$ vi out mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & mpiexec_qltang1 (handle_stdin_input 1089): stdin problem; if pgm is run in background, redirect from /dev/null mpiexec_qltang1 (handle_stdin_input 1090): e.g.: mpiexec -n 4 a.out < /dev/null & WARNING: random wavefunctions but no delay for mixing, default for NELMDL entering main loop N E dE d eps ncg rms rms(c) Assertion failed in file /opt/software/tmp/mpich2-1.2.1p1/src/mpid/ch3/channels/nemesis/nemesis/include/mpid_nem_inline.h at line 728: local_rank < MPID_nem_mem_region.num_local internal ABORT - process 1 rank 5 in job 44 qltang1_54199 caused collective abort of all ranks exit status of rank 5: killed by signal 11 rank 1 in job 44 qltang1_54199 caused collective abort of all ranks exit status of rank 1: return code 1 ------------------------------------------------------------ 我注意到報錯信息里有這樣一句話：“Assertion failed in file /opt/software/tmp/mpich2-1.2.1p1/src/mpid/ch3/channels/nemesis/nemesis/include/mpid_nem_inline.h at line 728: local_rank < MPID_nem_mem_region.num_local”。不知道m(xù)pich2為什么有時會出現這樣的錯誤？ 請達人指教，謝謝！ |
3樓2010-06-15 20:27:34
4樓2010-06-15 22:19:39
| 最具人氣熱帖推薦 [查看全部] | 作者 | 回/看 | 最后發(fā)表 | |
|---|---|---|---|---|
|
[考研] 材料工程專碩調劑 +5 | 204818@lcx 2026-03-17 | 6/300 |
|
|---|---|---|---|---|
|
[考研] 一志愿華中科技大學，080502，354分求調劑 +4 | 守候夕陽CF 2026-03-18 | 4/200 |
|
|
|
[考研] 材料專業(yè)求調劑 +5 | hanamiko 2026-03-18 | 5/250 |
|
|
|
[考研] 295求調劑 +3 | 一志愿京區(qū)211 2026-03-18 | 5/250 |
|
|
|
[考研] 070300化學319求調劑 +6 | 錦鯉0909 2026-03-17 | 6/300 |
|
|
|
[考研] 312求調劑 +8 | 陌宸希 2026-03-16 | 9/450 |
|
|
|
[考研] 0703化學調劑 +3 | 妮妮ninicgb 2026-03-17 | 3/150 |
|
|
|
[考研] 0703化學336分求調劑 +6 | zbzihdhd 2026-03-15 | 7/350 |
|
|
|
[考研] 301求調劑 +9 | yy要上岸呀 2026-03-17 | 9/450 |
|
|
|
[考研] 308求調劑 +4 | 是Lupa啊 2026-03-16 | 4/200 |
|
|
|
[考博] 26申博 +4 | 八旬速覽 2026-03-16 | 4/200 |
|
|
|
[考研] 326求調劑 +4 | 諾貝爾化學獎覬?/a> 2026-03-15 | 7/350 |
|
|
|
[考研] 304求調劑 +3 | 曼殊2266 2026-03-14 | 3/150 |
|
|
|
[考研] 0703化學調劑 290分有科研經歷，論文在投 +7 | 膩膩gk 2026-03-14 | 7/350 |
|
|
|
[考研] 288求調劑 +4 | 奇點0314 2026-03-14 | 4/200 |
|
|
|
[考研] 304求調劑 +6 | Mochaaaa 2026-03-12 | 7/350 |
|
|
|
[考研] 311求調劑 +3 | 冬十三 2026-03-13 | 3/150 |
|
|
|
[碩博家園] 085600 260分求調劑 +3 | 天空還下雨么 2026-03-13 | 5/250 |
|
|
|
[考研] 328化工專碩求調劑 +4 | 。，。，。，。i 2026-03-12 | 4/200 |
|
|
|
[考研] 070303一志愿西北大學學碩310找調劑 +3 | d如愿上岸 2026-03-13 | 3/150 |
|