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Free computer tools in Structural Bioinformatics and Chemoinformatics http://www.vls3d.com/links.html Table I: Patent search Table II: Chemistry toolkits, graphics (small and macro-molecules), other links to bioinformatics and utilities Table III: ADME/tox prediction and databases Table IV: Free compound collections, target-ligand databases and utilities Table V: Small molecules 2D-to-3D, 2D or 3D search and de novo ligand builder Table VIa: Receptor 3D structures, homology modeling, structure prediction and macromolecular interaction databases Table VIb: Pocket prediction and search for functional regions on targets, analysis of interfaces, Protein docking Table VII: Comparison of binding sites/protein functional sites – protein function prediction (see also Table VIb) Table VIII: Target analysis: flexibility – energy minimization – normal modes – molecular dynamics –water molecules in target – ions – pKa and electrostatics – point mutations and related utilities Table IX: Docking and/or scoring engines for small molecule-macromolecule interactions... Support Vector Machines References (they are either in the tables or at the end) 附件: B. O. Villoutreix, N. Renault, D. Lagorce, O. Sperandio, M. Montes and M. A. Miteva Free Resources to Assist Structure-Based Virtual Ligand Screening Experiments Review Current Protein and Peptide Science, 2007, 8(4):381-411. |
至尊木蟲 (職業(yè)作家)
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那就再看看: 化學(xué)信息學(xué)釋疑 http://www.gaoyang168.com/bbs/viewthread.php?tid=220153 關(guān)于化學(xué)信息學(xué)的誤解與錯誤 http://www.gaoyang168.com/bbs/viewthread.php?tid=469963 化學(xué)信息學(xué)是誰最先提出來的? http://www.gaoyang168.com/bbs/viewthread.php?tid=238233 為什么說化學(xué)信息學(xué)不是文獻(xiàn)檢索? http://www.gaoyang168.com/bbs/viewthread.php?tid=238892 計算機(jī)化學(xué)和化學(xué)信息學(xué)聯(lián)系和區(qū)別 http://www.www.gaoyang168.com/viewarticle.php?id=237776 關(guān)于國內(nèi)從事計算機(jī)化學(xué)研究的一些情況 http://www.www.gaoyang168.com/viewarticle.php?id=237889 關(guān)于計算機(jī)化學(xué)的書籍 http://www.www.gaoyang168.com/bbs/viewthread.php?tid=237895 計算機(jī)輔助有機(jī)合成的歷史與人物(中國) http://www.www.gaoyang168.com/bbs/viewthread.php?tid=369487 計算機(jī)輔助有機(jī)合成的歷史與人物(外國) http://www.www.gaoyang168.com/bbs/viewthread.php?tid=369471 [ Last edited by yalefield on 2008-2-4 at 23:29 ] |
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