| 5 | 1/1 | 返回列表 |
| 查看: 2645 | 回復(fù): 13 | ||
| 當(dāng)前只顯示滿足指定條件的回帖,點(diǎn)擊這里查看本話題的所有回帖 | ||
mymarik鐵桿木蟲 (小有名氣)
|
[求助]
安裝lammps的時(shí)候 出現(xiàn)fftw3d相關(guān)的一些提示 能幫我看看是什么問題嗎 已有2人參與
|
|
|
我在想是不是 要去除某個(gè) package fft3d.o:在函數(shù)‘fft_3d’中: /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:151:對(duì)‘fftwf_execute_dft’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:214:對(duì)‘fftwf_execute_dft’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:277:對(duì)‘fftwf_execute_dft’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:151:對(duì)‘fftwf_execute_dft’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:214:對(duì)‘fftwf_execute_dft’未定義的引用 fft3d.o:/home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:277: 跟著更多未定義的參考到 fftwf_execute_dft fft3d.o:在函數(shù)‘fft_3d_create_plan’中: /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:852:對(duì)‘fftwf_plan_many_dft’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:857:對(duì)‘fftwf_plan_many_dft’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:862:對(duì)‘fftwf_plan_many_dft’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:867:對(duì)‘fftwf_plan_many_dft’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:872:對(duì)‘fftwf_plan_many_dft’未定義的引用 fft3d.o:/home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:877: 跟著更多未定義的參考到 fftwf_plan_many_dft fft3d.o:在函數(shù)‘fft_3d_destroy_plan’中: /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:987:對(duì)‘fftwf_destroy_plan’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:988:對(duì)‘fftwf_destroy_plan’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:989:對(duì)‘fftwf_destroy_plan’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:990:對(duì)‘fftwf_destroy_plan’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:991:對(duì)‘fftwf_destroy_plan’未定義的引用 fft3d.o:/home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:992: 跟著更多未定義的參考到 fftwf_destroy_plan fft3d.o:在函數(shù)‘fft_1d_only’中: /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:1218:對(duì)‘fftwf_execute_dft’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:1223:對(duì)‘fftwf_execute_dft’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:1228:對(duì)‘fftwf_execute_dft’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:1218:對(duì)‘fftwf_execute_dft’未定義的引用 /home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:1223:對(duì)‘fftwf_execute_dft’未定義的引用 fft3d.o:/home/tree/Software/lammps/src/Obj_mpi/../fft3d.cpp:1228: 跟著更多未定義的參考到 fftwf_execute_dft collect2: error: ld returned 1 exit status Makefile:91: recipe for target '../lmp_mpi' failed make[1]: *** [../lmp_mpi] Error 1 make[1]: Leaving directory '/home/tree/Software/lammps/src/Obj_mpi' Makefile:129: recipe for target 'mpi' failed make: *** [mpi] Error 2 |
木蟲 (小有名氣)
|
你可以看看我最新發(fā)布的資源,在小木蟲里,題為“Ubuntu中l(wèi)ammps串并行安裝帶reax/meam/poems全解讀”。希望會(huì)對(duì)你有幫助的。 發(fā)自小木蟲Android客戶端 |
木蟲 (正式寫手)
鐵桿木蟲 (小有名氣)
|
如果不安裝多余的package(即用系統(tǒng)默認(rèn)的package) 可以成功編譯 而且能跑一部分例子 # mpi = default MPI compiler, default MPI SHELL = /bin/sh # --------------------------------------------------------------------- # compiler/linker settings # specify flags and libraries needed for your compiler CC = g++ #mpicxx CCFLAGS = -g -O3 -DLAMMPS_MEMALIGN=64 SHFLAGS = -fPIC DEPFLAGS = -M LINK = g++ #mpicxx LINKFLAGS = -g -O LIB = SIZE = size ARCHIVE = ar ARFLAGS = -rc SHLIBFLAGS = -shared # --------------------------------------------------------------------- # LAMMPS-specific settings, all OPTIONAL # specify settings for LAMMPS features you will use # if you change any -D setting, do full re-compile after "make clean" # LAMMPS ifdef settings # see possible settings in Section 2.2 (step 4) of manual LMP_INC = -DLAMMPS_GZIP # MPI library # see discussion in Section 2.2 (step 5) of manual # MPI wrapper compiler/linker can provide this info # can point to dummy MPI library in src/STUBS as in Makefile.serial # use -D MPICH and OMPI settings in INC to avoid C++ lib conflicts # INC = path for mpi.h, MPI compiler settings # PATH = path for MPI library # LIB = name of MPI library MPI_INC = -DMPICH_SKIP_MPICXX -I/home/tree/Software/mpich/src/include MPI_PATH = -L/usr/local/lib MPI_LIB = -lmpich -lmpl -lpthread # FFT library # see discussion in Section 2.2 (step 6) of manual # can be left blank to use provided KISS FFT library # INC = -DFFT setting, e.g. -DFFT_FFTW, FFT compiler settings # PATH = path for FFT library # LIB = name of FFT library FFT_INC = -DFFT_FFTW3 -DFFT_SINGLE -I/home/tree/Software/fftw/kernel FFT_PATH = -L/usr/local/lib FFT_LIB = -lfftw3 # JPEG and/or PNG library # see discussion in Section 2.2 (step 7) of manual # only needed if -DLAMMPS_JPEG or -DLAMMPS_PNG listed with LMP_INC # INC = path(s) for jpeglib.h and/or png.h # PATH = path(s) for JPEG library and/or PNG library # LIB = name(s) of JPEG library and/or PNG library JPG_INC = -I/home/tree/Software/jpeg JPG_PATH = -L/usr/local/lib JPG_LIB = /usr/local/lib/libjpeg.a # --------------------------------------------------------------------- # build rules and dependencies # do not edit this section include Makefile.package.settings include Makefile.package EXTRA_INC = $(LMP_INC) $(PKG_INC) $(MPI_INC) $(FFT_INC) $(JPG_INC) $(PKG_SYSINC) EXTRA_PATH = $(PKG_PATH) $(MPI_PATH) $(FFT_PATH) $(JPG_PATH) $(PKG_SYSPATH) EXTRA_LIB = $(PKG_LIB) $(MPI_LIB) $(FFT_LIB) $(JPG_LIB) $(PKG_SYSLIB) EXTRA_CPP_DEPENDS = $(PKG_CPP_DEPENDS) EXTRA_LINK_DEPENDS = $(PKG_LINK_DEPENDS) # Path to src files vpath %.cpp .. vpath %.h .. # Link target $(EXE): $(OBJ) $(EXTRA_LINK_DEPENDS) $(LINK) $(LINKFLAGS) $(EXTRA_PATH) $(OBJ) $(EXTRA_LIB) $(LIB) -o $(EXE) $(SIZE) $(EXE) # Library targets lib: $(OBJ) $(EXTRA_LINK_DEPENDS) $(ARCHIVE) $(ARFLAGS) $(EXE) $(OBJ) shlib: $(OBJ) $(EXTRA_LINK_DEPENDS) $(CC) $(CCFLAGS) $(SHFLAGS) $(SHLIBFLAGS) $(EXTRA_PATH) -o $(EXE) \ $(OBJ) $(EXTRA_LIB) $(LIB) # Compilation rules %.o:%.cpp $(EXTRA_CPP_DEPENDS) $(CC) $(CCFLAGS) $(SHFLAGS) $(EXTRA_INC) -c $< %.d:%.cpp $(EXTRA_CPP_DEPENDS) $(CC) $(CCFLAGS) $(EXTRA_INC) $(DEPFLAGS) $< > $@ %.o:%.cu $(EXTRA_CPP_DEPENDS) $(CC) $(CCFLAGS) $(SHFLAGS) $(EXTRA_INC) -c $< # Individual dependencies DEPENDS = $(OBJ:.o=.d) sinclude $(DEPENDS) |
木蟲 (正式寫手)
|
FFT_INC = -DFFT_FFTW3 -DFFT_SINGLE -I/home/tree/Software/fftw/kernel FFT_PATH = -L/usr/local/lib FFT_LIB = -lfftw3 看到這里,我有如下推測,不知準(zhǔn)不準(zhǔn)確:樓主的fftw是自己進(jìn)行編譯,并且設(shè)置configure的時(shí)候 使用了./configure --prefix=/home/tree/Software/fftw。如果我的想法是成立的話,我建議樓主將FFT_PATH改成FFT_PATH=-L/home/tree/Software/fftw/lib, 將FFT_INC改成 FFT_INC = -DFFT_FFTW3 -DFFT_SINGLE -I/home/tree/Software/fftw/include 其他不變。 如果以上推測成立,即樓主自行編譯安裝了mpich,并且使用了--prefix=/home/tree/Software/mpich/ 建議樓主做相應(yīng)修改,即MPI_INC = -DMPICH_SKIP_MPICXX -I/home/tree/Software/mpich/include 和MPI_PATH = -L/home/tree/Software/mpich/lib MPI_INC = -DMPICH_SKIP_MPICXX -I/home/tree/Software/mpich/src/include MPI_PATH = -L/usr/local/lib MPI_LIB = -lmpich -lmpl -lpthread 對(duì)于JPG,建議也做如上相應(yīng)的修改。 JPG_INC = -I/home/tree/Software/jpeg JPG_PATH = -L/usr/local/lib JPG_LIB = /usr/local/lib/libjpeg.a |
| 最具人氣熱帖推薦 [查看全部] | 作者 | 回/看 | 最后發(fā)表 | |
|---|---|---|---|---|
|
[考研] 081700 調(diào)劑 267分 +6 | 迷人的哈哈 2026-03-23 | 6/300 |
|
|---|---|---|---|---|
|
[考研] 材料專碩英一數(shù)二306 +8 | z1z2z3879 2026-03-18 | 8/400 |
|
|
[考研] 336化工調(diào)劑 +4 | 王大坦1 2026-03-23 | 5/250 |
|
|
[考研] 287求調(diào)劑 +8 | 晨昏線與星海 2026-03-19 | 9/450 |
|
|
[考研] 求調(diào)劑 +6 | 十三加油 2026-03-21 | 6/300 |
|
|
[考研] 一志愿中南化學(xué)(0703)總分337求調(diào)劑 +9 | niko- 2026-03-19 | 10/500 |
|
|
[考研] 求調(diào)劑 +5 | Zhangbod 2026-03-21 | 7/350 |
|
|
[考研] 0703化學(xué)297求調(diào)劑 +3 | Daisy☆ 2026-03-20 | 3/150 |
|
|
[考研] 307求調(diào)劑 +3 | 余意卿 2026-03-18 | 3/150 |
|
|
[考研] 296求調(diào)劑 +4 | www_q 2026-03-20 | 4/200 |
|
|
[考研] 279求調(diào)劑 +5 | 紅衣隱官 2026-03-21 | 5/250 |
|
|
[考研] 化學(xué)求調(diào)劑 +4 | 臨澤境llllll 2026-03-17 | 5/250 |
|
|
[考研] 一志愿西南交大,求調(diào)劑 +5 | 材化逐夢(mèng)人 2026-03-18 | 5/250 |
|
|
[考研] 308求調(diào)劑 +3 | 阿姐阿姐家啊 2026-03-18 | 3/150 |
|
|
[考研] 288求調(diào)劑 +16 | 于海海海海 2026-03-19 | 16/800 |
|
|
[考研]
|
簡木ChuFront 2026-03-19 | 8/400 |
|
|
[考研] 材料學(xué)求調(diào)劑 +4 | Stella_Yao 2026-03-20 | 4/200 |
|
|
[考研] 一志愿吉林大學(xué)材料學(xué)碩321求調(diào)劑 +11 | Ymlll 2026-03-18 | 15/750 |
|
|
[考研] 材料,紡織,生物(0856、0710),化學(xué)招生啦 +3 | Eember. 2026-03-17 | 9/450 |
|
|
[論文投稿] 有沒有大佬發(fā)小論文能帶我個(gè)二作 +3 | 增銳漏人 2026-03-17 | 4/200 |
|